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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916107.1_cds_XP_016465803.1_58721
CDS Infomation

[gene=LOC107788625] [db_xref=GeneID:107788625] [protein=3-isopropylmalate dehydratase large subunit-like] [protein_id=XP_016465803.1] [location=join(10961..11008,11124..11261,12104..12274,13107..13259,13362..13430,13530..13646,14230..14304,14433..14510,14590..14685,14836..14885,15224..15278,15547..15678,16325..16372,16462..16620,17292..17432)] [gbkey=CDS]
Sequence

ATGGCGTCTTCAGCTATAGCCTCAAGCTCCACATCTTTCATCAACAAGAAAGATGTAGGA
CTGTCAGCTTTCTCATCACAGCCTTCGTTTTGCATTCAAACTGCCAAGAAGAAAATGGTT
TCCAAGAAAATATTCTCTGTGATGTTACCACAACAGAGTGAACGCAAACCAGCTACCACT
GGCTCAGTAAAGACTGGGATGACTATGACGGAGAAGATATTAGCTAAGGCTTGTGGCAAG
CCTGAGGTAACTCCAGGTGAAAATGTGTGGGCCAATATTGATGTTCTGATGACACATGAT
GGTTGTGGCCCTGGCACTATTGGAATTTTTAAGAAACAGTTTGGGCAGAATGCTAAGGTA
TGGGATCCTGAGAAGATTGTTGTTATACCTGACCACTTTGTATTCACGGCCAATGAACGA
GCACACCGTAATTTGGATACACTGAGGGACTTCTGCACTGAGCAAAATATTAAGTACTTC
TATGACATTAAAGATCGTGGGAACTTCCAGGTTAATCCAGATTATAAAGGAGTTTGCCAC
ATTGCGCTTGCCCAAGAAGGTCACTGCAGACCTGGAGAGGTTTTGTTAGGCACAGACTCT
CATACATGTAATGCTGGAGCTTTTGGTCAATTTGCTACTGGAATTGGCAATACGGATGCA
GGTTTTGTGTTGGGTACCGGAAAGCTTTTACTCAAGGTGCCTGCAACTTTGAGATTTGTT
TTGGATGGTGAAATGCCCAATTACTTGCTTGCTAAAGACTTGATTTTGCAAATTATTGGT
GAAATATCTGTGGCTGGTGCCACATACAAAACAATGGAGTTTGCTGGCACCACAGTTGAA
AGCTTGAGTATGGAAGAAAGAATGACATTGTGCAACATGGTTGTTGAAGCTGGTGGAAAG
AATGGTGTCATCCCAGCCGATAAAACAACATATGACTATCTTAAGGACAAGACATCTGTG
CCATATGAACCTGTTTATAGTGATGGAGGAGCCAGATTTCTTAAAGAATACCGAATTGAT
ATCTCCAAGTTGGAGCCTTTGGTGGCAAAGCCTCATTCACCTGACAATCGTGCTTTGGCA
AGAGAATGCAAGGATGTGAAAATCGACAGAGTATATATTGGATCTTGTACTGGTGGAAAG
ACAGAGGATTTCATGTCTGCTGCAAAACTTTTCCAAGTTTCTGGAAAGAAAGTGAAGGTT
CCAACTTTCCTTGTTCCTGCTACTCGAGAGGTGTGGATGGATATATATAGTCTCCCGGTT
CCAGGATCCGGTGGTAAAACATGTTCCGAGATTTTCCAGGAAGCTGGTTGTTATGAACCT
GCTAGTCCTAGTTGTGGTGCTTGTCCTGGCGGCCTTCCAGACACTTATGGACGGCTCAAT
GAACCTAAGGTGTGCGTTTCGACCACAAACAGGAACTTTCCAGGTAGAATGGGGCACATT
GAAGGTCAGATATATCTTGCATCCCCATATACAGCTGCAGCATCAGCATTGACTGGTTAT
GTCACTGATCCTAGAGACTTTTTGATGTGA

Peptide Sequence

PEP ID

XP_016465803.1
PEP Infomation

PREDICTED: 3-isopropylmalate dehydratase large subunit-like [Nicotiana tabacum]
Sequence

MASSAIASSSTSFINKKDVGLSAFSSQPSFCIQTAKKKMVSKKIFSVMLPQQSERKPATT
GSVKTGMTMTEKILAKACGKPEVTPGENVWANIDVLMTHDGCGPGTIGIFKKQFGQNAKV
WDPEKIVVIPDHFVFTANERAHRNLDTLRDFCTEQNIKYFYDIKDRGNFQVNPDYKGVCH
IALAQEGHCRPGEVLLGTDSHTCNAGAFGQFATGIGNTDAGFVLGTGKLLLKVPATLRFV
LDGEMPNYLLAKDLILQIIGEISVAGATYKTMEFAGTTVESLSMEERMTLCNMVVEAGGK
NGVIPADKTTYDYLKDKTSVPYEPVYSDGGARFLKEYRIDISKLEPLVAKPHSPDNRALA
RECKDVKIDRVYIGSCTGGKTEDFMSAAKLFQVSGKKVKVPTFLVPATREVWMDIYSLPV
PGSGGKTCSEIFQEAGCYEPASPSCGACPGGLPDTYGRLNEPKVCVSTTNRNFPGRMGHI
EGQIYLASPYTAAASALTGYVTDPRDFLM

Transcript Sequence

Gene sequence data has not been registered.